• well-tempered metadynamics is used to change the Gaussian size adaptively. Also, the Gaussian width can be adapted with the adaptive Gaussian metadynamics. Metadynamics...
    32 KB (3,757 words) - 09:01, 25 October 2023
  • management Entity Data Model Euclidean distance matrix Experiment-directed metadynamics Edmonton, Alberta, Canada Edmonds station, Edmonds, Washington, United...
    1 KB (170 words) - 03:09, 3 November 2023
  • recent advances have been the development of the Martonak version of metadynamics, the Oganov-Glass evolutionary algorithm USPEX, and first principles...
    16 KB (1,425 words) - 00:00, 13 January 2024
  • Thumbnail for Crystal structure
    using such approaches as evolutionary algorithms, random sampling, or metadynamics. The crystal structures of simple ionic solids (e.g., NaCl or table salt)...
    45 KB (5,143 words) - 18:23, 8 August 2024
  • dynamism, dynamite, dynamo, dynast, dynastic, dynasty, heterodyne, metadynamics dys- badly, ill Greek δυσ- (dus-) dysentery, dysphagia, dysphasia, dysplasia...
    1 KB (1,500 words) - 06:14, 16 April 2024
  • (MPI) libraries, allowing replica exchange simulations, multiple walkers metadynamics simulations and multiple steered molecular dynamics nonequilibrium trajectories...
    4 KB (306 words) - 09:13, 18 August 2023
  • Thumbnail for Intrinsically disordered proteins
    techniques such as accelerated-MD simulations, replica exchange simulations, metadynamics, multicanonical MD simulations, or methods using coarse-grained representation...
    52 KB (6,004 words) - 15:08, 6 May 2024
  • device, a type of device file in Linux for interacting with flash memory Metadynamics, a computer simulation method in computational physics, chemistry and...
    1 KB (201 words) - 16:23, 7 January 2024
  • Thumbnail for CP2K
    all-electron calculations. CP2K can do simulations of molecular dynamics, metadynamics, Monte Carlo, Ehrenfest dynamics, vibrational analysis, core level spectroscopy...
    7 KB (582 words) - 20:31, 22 July 2024
  • potential (as done in the metadynamics method) or the bias potential can be used for umbrella sampling (as done in metadynamics with umbrella sampling corrections...
    8 KB (1,129 words) - 07:26, 25 October 2023
  • Thumbnail for J. Doyne Farmer
    Theiler and Seth Lloyd. Farmer and Norman Packard developed the concept of metadynamics, i.e. co-evolving networks and dynamical systems. For example, the nodes...
    29 KB (3,273 words) - 22:07, 14 June 2024
  • the folding of proteins. The Wang–Landau sampling is related to the metadynamics algorithm. The Wang and Landau algorithm is used to obtain an estimate...
    17 KB (2,677 words) - 04:17, 22 July 2024
  • Laio, Alessandro (2012-01-01). "METAGUI. A VMD interface for analyzing metadynamics and molecular dynamics simulations". Computer Physics Communications...
    4 KB (284 words) - 13:38, 12 August 2024
  • dynamism, dynamite, dynamo, dynast, dynastic, dynasty, heterodyne, metadynamics dys- badly, ill Greek δυσ- (dus-) dysentery, dysphagia, dysphasia, dysplasia...
    19 KB (172 words) - 09:02, 11 August 2023
  • Thumbnail for Swainsonine
    the Glycosylation Step Catalyzed by Golgi α-Mannosidase II: A QM/MM Metadynamics Investigation". Journal of the American Chemical Society. 132 (24): 8291–8300...
    19 KB (1,801 words) - 00:11, 12 July 2024
  • Thumbnail for Marta Filizola
    molecular mechanisms of ligand recognition by opioid receptors with metadynamics". Biochemistry. 48 (42): 10020–9. doi:10.1021/bi901494n. PMC 2764813...
    20 KB (2,163 words) - 16:06, 23 July 2024
  • Thumbnail for Michele Parrinello
    Physical Review Letters) Parrinello–Rahman algorithm Flying ice cube Metadynamics Machine learning potential "2020 European Chemistry Gold Medal will be...
    8 KB (639 words) - 07:22, 4 July 2024
  • including density functional theory (DFT), molecular dynamics, docking, and metadynamics. The distribution coefficient predictions were introduced for the first...
    23 KB (2,725 words) - 19:20, 31 December 2023
  • stresses have to be high. Some authors have used the term 'postdynamic' or 'metadynamic' to describe recrystallization that occurs during the cooling phase of...
    15 KB (1,953 words) - 18:33, 23 November 2022
  • Thumbnail for Smoothened
    Effect of Antagonist Vismodegib on Smoothened Receptor Deactivation Using Metadynamics Simulation". Front Chem. 7: 406. Bibcode:2019FrCh....7..406Y. doi:10...
    28 KB (3,490 words) - 16:24, 17 March 2024
  • Meta-material cloak Meta-materials cloak Meta material Meta materials Metadynamics Metafluid dynamics Metal Metal-induced gap states Metal K-edge Metal...
    24 KB (2,452 words) - 23:49, 30 June 2024