In molecular biology and genetics, GC-content (or guanine-cytosine content) is the percentage of nitrogenous bases in a DNA or RNA molecule that are either...
19 KB (2,201 words) - 07:34, 2 November 2024
Actinomycetota (redirect from High GC-content bacteria)
Actinobacteria) are a diverse phylum of Gram-positive bacteria with high GC content. They can be terrestrial or aquatic. They are of great importance to land...
21 KB (1,733 words) - 11:02, 20 September 2024
Look up GC in Wiktionary, the free dictionary. GC may stand for: The GC, the alter ego of English media personality and businesswoman Gemma Collins (born...
4 KB (574 words) - 04:15, 30 August 2024
Gene conversion (section GC-biased gene conversion)
selective pressure. GC content varies widely in the human genome (40–80%), but there seem to be large sections of the genome where GC content is, on average...
24 KB (3,080 words) - 14:41, 13 October 2024
of Gs and Cs to As and Ts (GC-content), which led to the hypothesis that thermal stability was a driving factor of GC-content variation. However, while...
50 KB (6,063 words) - 09:27, 2 November 2024
comparatively still GC-poor, similar to the low GC-content of the base composition translational stop codons like TAG, TAA, and TGA. GC-rich areas are also...
22 KB (2,502 words) - 18:17, 18 November 2024
commonly referred to as A, G, C, and T. The GC-content is the percentage of G & C bases within a genome. GC-content varies greatly between different organisms...
42 KB (4,951 words) - 07:43, 2 November 2024
100% GC content to 978.6005 Mbp/pg for 0% GC content (A/T being lighter, has more Mbp/pg), with a midpoint of 977.8155 Mbp/pg for 50% GC content. The...
19 KB (2,222 words) - 20:05, 26 August 2024
horizontal transfer. For example, because bacterial GC content falls within a wide range, GC content of a genome segment is a simple genomic signature....
79 KB (8,981 words) - 18:21, 11 May 2024
the "right" pairs to form stably. DNA with high GC-content is more stable than DNA with low GC-content. Crucially, however, stacking interactions are primarily...
32 KB (3,701 words) - 23:08, 9 November 2024
time, DNA with a high GC content is usually less condensed, that is, it tends to appear as euchromatin rather than heterochromatin. GC rich DNA tends to contain...
59 KB (6,999 words) - 21:00, 17 October 2024
correlate with GC-content. For example, the E. coli K-12 genome contains 2705 TAA (63%), 1257 TGA (29%), and 326 TAG (8%) stop codons (GC content 50.8%). Also...
30 KB (2,821 words) - 22:41, 9 November 2024
called a Watson-Crick base pair. DNA with high GC-content is more stable than DNA with low GC-content. A Hoogsteen base pair (hydrogen bonding the 6-carbon...
166 KB (17,843 words) - 13:16, 19 September 2024
repetitive content and 40.46% of GC content. Specifically, macro-chromosomes, which represent 88% of the genome, have 39.8% of GC content, while micro-chromosomes...
46 KB (4,604 words) - 09:01, 31 October 2024
been found that the GC-content of ribosomal RNA (the traditional phylogenetic marker for prokaryotes) little reflects the GC-content of the genome. One...
24 KB (2,048 words) - 01:44, 16 November 2024
genome of Micrococcus is rich in guanine and cytosine (GC), typically exhibiting 65 to 75% GC-content. Micrococci often carry plasmids (ranging from 1 to...
10 KB (928 words) - 00:26, 25 September 2024
CpG site (redirect from Gc-rich area)
they had a GC content greater than 55%, and an observed-to-expected CpG ratio of 65%. CpG islands are characterized by CpG dinucleotide content of at least...
51 KB (5,481 words) - 20:28, 15 August 2024
highly conserved among vertebrates. The 3' part of the promoter has high GC content and is thus refractory to PCR amplification. Some of the CAG promoter's...
3 KB (448 words) - 05:08, 28 October 2024
sequence of a gene may change the frequency of guanine-cytosine base pairs (GC content). These base pairs have a higher thermal stability (melting point) than...
31 KB (3,335 words) - 21:19, 29 September 2024
DNA with a distinct guanine (G) and cytosine (C) G-C and C-G content (collectively GC content). The homogeneity of compositional domains is compared to that...
19 KB (1,308 words) - 05:27, 2 November 2024
supercoiled plasmids (to relax before amplification) or DNA templates with high GC-content (to decrease thermostability). For example, 10% final concentration of...
38 KB (3,969 words) - 18:58, 5 November 2024
equitans' genome consists of a single circular chromosome, and has an average GC-content of 31.6%. It lacks almost all of the genes required for the synthesis...
9 KB (993 words) - 09:01, 20 June 2024
Nocardia and Streptomyces genera. The (low G + C) Bacillota, have a 45–60% GC content, but this is lower than that of the Actinomycetota. Although bacteria...
24 KB (2,653 words) - 14:36, 28 October 2024
(ORFs), compared to 2.27 Mb and 2,465 ORFs for MC58. Both strains have a GC content of 51.5%. A comparison with MC58 showed that four genes are uniquely present...
41 KB (4,640 words) - 00:18, 14 November 2024
streptomycetes are gram-positive, and have very large genomes with high GC content. Found predominantly in soil and decaying vegetation, most streptomycetes...
39 KB (3,754 words) - 15:17, 2 November 2024
transferred within a plasmid or can be found in bacteriophage genomes. The GC-content and codon usage of pathogenicity islands often differs from that of the...
8 KB (887 words) - 01:53, 9 November 2024
have been published. C. auris has a genome size of 12.3–12.5 Mb with a GC-content of 44.5–44.8%. The C. auris genome was found to encode several genes for...
27 KB (2,799 words) - 17:08, 7 November 2024
DNA (greater than 300 kilobases) with a high degree of uniformity in GC content; that is, guanine (G) and cytosine (C) bases. The distribution of bases...
29 KB (3,300 words) - 09:12, 2 November 2024
gene (GenBank nucleotide sequence under accession number GQ217533). The GC content (38%) of this gene, its genetic environment, the lack of conjugal transfer...
16 KB (1,802 words) - 18:52, 14 November 2024
sequenced and is 7Mbp in size and spread across 7 chromosomes. The high GC content (70%) makes it challenging to engineer. Sp245 can be transformed with...
7 KB (762 words) - 19:08, 15 December 2023