In population genetics, linkage disequilibrium (LD) is a measure of non-random association between segments of DNA (alleles) at different positions on...
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In statistical genetics, linkage disequilibrium score regression (LDSR or LDSC) is a technique that aims to quantify the separate contributions of polygenic...
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equilibrioception Dialysis disequilibrium syndrome Political science Status-income disequilibrium Population genetics Linkage disequilibrium, the non-random association...
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Association mapping (redirect from Linkage disequilibrium mapping)
as "linkage disequilibrium mapping", is a method of mapping quantitative trait loci (QTLs) that takes advantage of historic linkage disequilibrium to link...
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Genome-wide association study Identity by descent Lander–Green algorithm Linkage disequilibrium Structural motif Cooper, DN; Krawczak, M; Polychronakos, C; Tyler-Smith...
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Population genetics (section Linkage)
dominance, epistasis, the degree to which genetic recombination breaks linkage disequilibrium, and the random phenomena of mutation and genetic drift. This makes...
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Tag SNP (section Linkage Disequilibrium)
nucleotide polymorphism (SNP) in a region of the genome with high linkage disequilibrium that represents a group of SNPs called a haplotype. It is possible...
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genomics may also be used to detect inversions, using areas of high linkage disequilibrium as indicators for possible inversion sites. Human families that...
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clear blocks of linkage disequilibrium, although with low recombination it can still lead to slightly negative linkage disequilibrium overall. Darwin's...
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the latter, because some linkage disequilibrium is initially needed to select for tighter linkage, and linkage disequilibrium requires both the previous...
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as "linkage disequilibrium mapping", is a method of mapping quantitative trait loci (QTLs) that takes advantage of historic linkage disequilibrium to link...
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Conservation genomics (section Linkage disequilibrium)
linkage disequilibrium plays a large analytical role. The term linkage disequilibrium concedes that there may also be a disruption or lack of linkage...
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locus and linkage disequilibrium in surrounding regions. White maize lines had increased diversity and no evidence of linkage disequilibrium associated...
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Vanja; Albrecht, Mark; Maiers, Martin (2015-09-07). "Asymmetric linkage disequilibrium: Tools for assessing multiallelic LD". Human Immunology. 77 (3):...
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through a selective sweep, any other nearby polymorphisms that are in linkage disequilibrium will tend to change their allele frequencies too. Selective sweeps...
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markers. However, there are information lost in the process such as linkage disequilibrium and zygosity information. Association studies can determine whether...
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disequilibrium test (TDT) was proposed by Spielman, McGinnis and Ewens (1993) as a family-based association test for the presence of genetic linkage between...
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Data Analysis Heat Map Example: Displays the normalized linkage disequilibrium of Genomic Windows within the Hist1 region of a mouse (Mus musculus)....
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Longeri, Maria; Lyons, Leslie A. (January 7, 2013). "Extent of Linkage Disequilibrium in the Domestic Cat, Felis silvestris catus, and Its Breeds". PLOS...
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chromosome" with this reference point. The authors interpreted this linkage disequilibrium in the Ashkenazi Jewish population as matching signs "of interbreeding...
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tests of Hardy–Weinberg equilibrium, inbreeding coefficient, etc.); Linkage disequilibrium (LD) calculation; Identity by descent (IBD) and identity by state...
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a systems level. Another measure of correlation is linkage disequilibrium. Linkage disequilibrium describes the non-random association of genetic sequences...
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trait as well as genomic features like linkage disequilibrium. (One Bayesian method uses "linkage disequilibrium prediction" or LDpred.) More approaches...
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application of the test in genetics is the transmission disequilibrium test for detecting linkage disequilibrium. The commonly used parameters to assess a diagnostic...
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unknown function or structure. RCCX modules exhibit a high degree of linkage disequilibrium, meaning that genes are inherited together more frequently than...
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model free. Variance component methods may be viewed as hybrids. Linkage disequilibrium (LD) and association mapping is receiving considerable attention...
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HLA DR3-DQ2 (section Genetic Linkage)
A1-B8-DR3-DQ2 (AH8.1 in the most recent literature) Because of its strong linkage disequilibrium, each of the genes in the haplotype are markers for probable presence...
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proximity on the same chromosome; this is known as genetic linkage.[citation needed] Linkage disequilibrium (LD) is a term used in the study of population genetics...
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mapping Genetic association Genetic linkage Genome-wide association study Identity by type Linkage disequilibrium Population genetics Browning, S. R....
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physical trait may also be selected for due to mechanisms like linkage disequilibrium. Often, juvenile behaviors are selected for in order to more easily...
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