analysis and interpretation (either directly, or via user downloads). Microarray databases can fall into two distinct classes: A peer reviewed, public repository...
6 KB (387 words) - 21:51, 21 September 2023
carbohydrate microarrays is expanding. Types of microarrays include: DNA microarrays, such as cDNA microarrays, oligonucleotide microarrays, BAC microarrays and...
15 KB (1,690 words) - 19:05, 13 February 2024
A DNA microarray (also commonly known as DNA chip or biochip) is a collection of microscopic DNA spots attached to a solid surface. Scientists use DNA...
54 KB (5,428 words) - 18:41, 18 September 2024
find databases containing cancer data among the List of biological databases or Microarray databases. Cancer Research List of biological databases Microarray...
8 KB (166 words) - 15:57, 15 April 2024
Microarray analysis techniques are used in interpreting the data generated from experiments on DNA (Gene chip analysis), RNA, and protein microarrays...
31 KB (3,559 words) - 08:05, 7 June 2024
genomics, proteomics, metabolomics, microarray gene expression, and phylogenetics. Information contained in biological databases includes gene function, structure...
14 KB (1,582 words) - 14:45, 17 July 2024
Other databases Nucleosome positioning region database Generic gene expression databases Microarray gene expression databases These databases collect...
36 KB (2,838 words) - 00:31, 17 August 2024
Tissue microarrays (also TMAs) consist of paraffin blocks in which up to 1000 separate tissue cores are assembled in array fashion to allow multiplex...
7 KB (758 words) - 02:56, 1 December 2023
Gene expression profiling (category Microarrays)
reliable than others; some are absent. Gene annotation databases change regularly, and various databases refer to the same protein by different names, reflecting...
30 KB (4,007 words) - 23:46, 24 July 2024
Gene Expression Omnibus (category Genetics databases)
are derived from microarray or RNA-Seq experimental data. These data need to conform to the minimum information about a microarray experiment (MIAME)...
3 KB (235 words) - 14:22, 7 February 2023
FGED Society (redirect from MicroArray and Gene Expression)
meeting on Microarray Gene Expression Databases in recognition of the need to establish standards for sharing and storing data from DNA microarray experiments...
11 KB (1,064 words) - 06:16, 14 September 2024
Gene expression (section Gene expression databases)
Microbe Microarrays Database: uniformly normalized Affymetrix compendia with structured experimental metadata". Nucleic Acids Research. 36 (Database issue):...
102 KB (11,438 words) - 16:50, 17 July 2024
Transcriptomics technologies (section Microarrays)
biological sciences. There are two key contemporary techniques in the field: microarrays, which quantify a set of predetermined sequences, and RNA-Seq, which...
120 KB (12,516 words) - 05:37, 20 May 2024
property database Integrated Nuclear Fuel Cycle Information System#Modules Magyar agár database Microarray database Message Addressing Database, for WS-Addressing...
669 bytes (107 words) - 21:36, 23 May 2020
RNA spike-in (category Microarrays)
Yang IV (2006). "Use of External Controls in Microarray Experiments". DNA Microarrays, Part B: Databases and Statistics. Methods in Enzymology. Vol. 411...
8 KB (853 words) - 12:55, 22 February 2024
Genevestigator (section Gene expression database)
expression database and tools to analyse the data. It exists in two versions, biomedical and plant, depending on the species of the underlying microarray and...
5 KB (670 words) - 00:20, 2 September 2023
UniPROBE (category Microarrays)
Evaluation (UniPROBE) is database of DNA-binding proteins determined by protein-binding microarrays. Protein microarray DNA-binding domain Newburger...
2 KB (157 words) - 16:25, 8 June 2018
metabolite names, GenBank IDs, Swiss-Prot IDs, Agilent or Affymetrix microarray IDs. These queries will produce lists of matching pathways and highlight...
7 KB (763 words) - 15:01, 19 January 2024
Biochip (category Microarrays)
differentiated. Microarrays are not limited to DNA analysis; protein microarrays, antibody microarray, chemical compound microarray can also be produced...
12 KB (1,666 words) - 11:10, 8 June 2023
Jauregui R, Kel-Margoulis O, Wingender E (September 2006). "Beyond microarrays: find key transcription factors controlling signal transduction pathways"...
10 KB (750 words) - 20:06, 22 January 2024
organisms to microarray data to IDs to RNA/protein expression. Chado makes extensive use of controlled vocabularies to type all entities in the database; for...
15 KB (956 words) - 15:22, 9 July 2024
A reverse phase protein lysate microarray (RPMA) is a protein microarray designed as a dot-blot platform that allows measurement of protein expression...
23 KB (2,925 words) - 03:50, 28 January 2024
MiRTarBase (category Biological databases)
collected MTIs are validated experimentally by reporter assay, western blot, microarray and next-generation sequencing experiments. While containing the largest...
2 KB (151 words) - 19:53, 7 July 2024
Consortium for Functional Glycomics (section Databases)
investigators, as well as data sets from other public databases. To increase the usability of these databases, Core B collaborates with the scientific cores...
14 KB (1,768 words) - 00:46, 22 June 2024
provides software for associating microarray and other genomic data in real time to biological metadata from web databases such as GenBank, LocusLink and...
18 KB (1,274 words) - 21:49, 22 July 2024
Transcriptome (section DNA microarrays)
biological techniques are used to study the transcriptome, namely DNA microarray, a hybridization-based technique and RNA-seq, a sequence-based approach...
40 KB (4,861 words) - 00:33, 8 August 2024
involved with the Stanford Microarray Database, an early attempt to organize the extensive data generated by DNA microarray analysis. In 2012, Sherlock...
2 KB (144 words) - 20:10, 20 June 2024
NONCODE (category Biological databases)
The NONCODE database is a collection of expression and functional lncRNA data obtained from re-annotated microarray studies. lncRNA Bu, Dechao; Yu, Kuntao;...
1 KB (83 words) - 16:16, 10 May 2022
MicrobesOnline (category Genome databases)
that integrates databases and tools of gene ontology. Kyoto Encyclopedia of Genes and Genomes (KEGG): a large collection of databases of genes, genomes...
43 KB (4,652 words) - 21:02, 11 December 2023
coccolithophores and other nannofossils. Cocco Express - Coccolithophorids Expressed Sequence Tags (EST) & Microarray Database Possible functions of Coccoliths...
25 KB (2,538 words) - 20:02, 17 September 2024