ORF1ab (also ORF1a/b) refers collectively to two open reading frames (ORFs), ORF1a and ORF1b, that are conserved in the genomes of nidoviruses, a group...
17 KB (1,381 words) - 00:22, 3 December 2023
non-structural protein in the Coronavirus genome. Its gene is part of the ORF1ab reading frame and it is part of the pp1ab polyprotein; it is cleaved by...
10 KB (1,238 words) - 18:11, 20 July 2024
The genome organization for a coronavirus is 5′-leader-UTR-replicase (ORF1ab)-spike (S)-envelope (E)-membrane (M)-nucleocapsid (N)-3′UTR-poly (A) tail...
96 KB (10,558 words) - 14:24, 12 October 2024
O-acetyl-esterase activity and the active site FGDS, is present downstream to ORF1ab and upstream to S gene (Figure 1). Vijgen, Leen; Keyaerts, Els; Moës, Elien;...
13 KB (1,529 words) - 08:38, 2 November 2024
by "ORF1ab+N" or "ORF1ab+N+S"). However, further uncertainty exists given that not all "New UK variant compatible" SGTF cases (positive on ORF1ab and...
219 KB (18,220 words) - 12:12, 13 October 2024
20C/S:452R, is defined by five distinct mutations (I4205V and D1183Y in the ORF1ab gene, and S13I, W152C, L452R in the spike protein's S-gene), of which the...
225 KB (21,639 words) - 04:23, 7 October 2024
papain-like proteinase (PLpro) instead of two in the open reading frame ORF1ab. SARSr-CoV was determined to be an early split-off from the betacoronaviruses...
52 KB (5,899 words) - 06:01, 22 August 2024
the polyprotein include gag (group-specific antigen) in retroviruses and ORF1ab in Nidovirales. The latter name refers to the fact that a slippery sequence...
34 KB (4,247 words) - 21:28, 2 November 2024
overall structure of β-CoV genome is similar to that of other CoVs, with an ORF1ab replicase polyprotein (rep, pp1ab) preceding other elements. This polyprotein...
15 KB (1,479 words) - 01:17, 9 March 2024
were identified with distinct strains of coronavirus. An interaction with orf1ab polyprotein of the human coronavirus strain HKU1(HCov-HKU1) was shown in...
46 KB (3,998 words) - 06:32, 20 September 2024
transcription and replication of viral RNAs. An alternative name is the ORF1ab polyprotein. It contains the polyprotein cleavage proteinases. The optimum...
18 KB (1,838 words) - 09:45, 6 January 2024
spike (S) gene was the second most frequently mutated in the genome, after ORF1ab (which encodes most of the virus' nonstructural proteins). The evolution...
75 KB (7,399 words) - 06:53, 9 November 2024
O-acetyl-esterase activity and the active site FGDS, is present downstream to ORF1ab and upstream to S gene (Figure 1). Lau, S. K. P.; Woo, P. C. Y.; Yip, C...
15 KB (1,682 words) - 23:14, 24 August 2024
products ORF1a and ORF1ab In the equine arterivirus (EAV), the replicase gene is translated into open reading frame 1a (ORF1a) and ORF1ab [polyprotein]s....
2 KB (245 words) - 13:59, 26 August 2023
in S-gene, A119S in N-gene, 5’UTR C100U, plus L3468V and synC11824U in ORF1ab-gene. Other mutations commonly found in P.2 are: 3’UTR C29754U, F120F (synC28253U)...
60 KB (4,943 words) - 20:50, 10 September 2024
VSPs: viral envelope Spike Envelope Membrane Nucleocapsid VNPs: ORF1ab 3C-like protease (NS5) ORF3a ORF3b ORF3c ORF3d ORF6 ORF7a ORF7b ORF8 ORF9b...
13 KB (1,457 words) - 17:30, 5 September 2024
CDC. The variant has five defining mutations (I4205V and D1183Y in the ORF1ab gene, and S13I, W152C, L452R in the spike protein's S-gene), of which the...
13 KB (980 words) - 20:51, 10 September 2024
O-acetyl-esterase activity and the active site FGDS, is present downstream to ORF1ab and upstream to S gene (Figure 1). Woo, Patrick C. Y.; Huang, Yi; Lau, Susanna...
6 KB (490 words) - 14:03, 26 July 2024
optional peptides. Certain T cell epitope peptides were also changed. "Orf1ab 5528T" replaced "Orf1 1636T" in the list of core peptides, because the former...
14 KB (1,349 words) - 12:35, 10 July 2024
long. The genome is dominated by two large open reading frames, ORF1a and ORF1ab; these code for two polyproteins, PP1a and PP1ab. These polyproteins are...
8 KB (1,024 words) - 09:30, 17 June 2021
VSPs: viral envelope Spike Envelope Membrane Nucleocapsid VNPs: ORF1ab 3C-like protease (NS5) ORF3a ORF3b ORF3c ORF3d ORF6 ORF7a ORF7b ORF8 ORF9b...
7 KB (732 words) - 14:30, 24 August 2024
major open reading frames (ORFs). Two overlapping ORFs, together known as ORF1ab, are at the 5'-end, encoding the major non-structural proteins and are expressed...
9 KB (861 words) - 06:43, 3 December 2023
O-acetyl-esterase activity and the active site FGDS, is present downstream to ORF1ab and upstream to S gene (Figure 1). Woo, Patrick C. Y.; Wang, Ming; Lau,...
6 KB (601 words) - 12:41, 30 January 2023
PLPro domains are expressed as part of the large polyprotein encoded by the ORF1ab gene. PLPro domains are responsible for proteolytic processing of the polyprotein...
11 KB (1,085 words) - 13:29, 22 May 2024
O-acetyl-esterase activity and the active site FGDS, is present downstream to ORF1ab and upstream to S gene (Figure 1). "Virus Taxonomy: 2018 Release". International...
34 KB (4,193 words) - 11:02, 18 June 2024
compared to other SARSr-CoV (by nucleotide %) Strain Full-length genome ORF1ab S RBM ORF3a E M ORF6 ORF7a ORF7b ORF8 N ORF10 RaTG13 96.10% 96.50% 92.30%...
6 KB (762 words) - 03:50, 12 December 2023
protein 2, NSP2 is one of the many non-structural proteins encoded in the orf1ab polyprotein. NSP2 alters the host cell environment rather than contribute...
76 KB (6,550 words) - 16:19, 30 March 2024