The Biopython project is an open-source collection of non-commercial Python tools for computational biology and bioinformatics, created by an international...
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molecular mechanics modeling List of proprietary bioinformatics software Biopython License "GeWorkbench License". geWorkbench. Columbia University. 15 June...
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Foundation was started in 2001, arising from the BioJava, BioPerl and BioPython projects. A formal membership for the foundation was created in 2005....
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of Python in scientific computing, with specialized libraries such as Biopython and Astropy providing domain-specific functionality. SageMath is a computer...
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implementation of similar bioinformatics packages such as BioPerl and BioPython. The initial release of version 0.1 was frequently updated by contributors...
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2015-03-29 at the Wayback Machine VCFtools DnaSP Popoolation2 BioPerl BioPython Peter Beerli, Estimation of migration rates and population sizes in geographically...
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Open-source bioinformatics software includes Bioconductor, BioPerl, Biopython, BioJava, BioJS, BioRuby, Bioclipse, EMBOSS, .NET Bio, Orange with its...
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programming packages which provide this conversion functionality, such as BioPython, BioRuby and BioPerl. The SAM/BAM files use the CIGAR (Compact Idiosyncratic...
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file extension for a FASTQ file, but .fq and .fastq are commonly used. Biopython version 1.51 onwards (interconverts Sanger, Solexa and Illumina 1.3+)...
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Kauff, Frank; Wilczynski, Bartek; de Hoon, Michiel J. L. (2009-06-01). "Biopython: freely available Python tools for computational molecular biology and...
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Python Astropy, a library of Python tools for astronomy and astrophysics. Biopython, a Python molecular biology suite Gensim, a library for natural language...
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Examples of such projects that fall under Bio* apart from BioJava are BioPython, BioPerl, BioRuby, EMBOSS etc. In October 2012, the first paper on BioJava...
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implementation of similar bioinformatics packages such as BioPerl and BioPython and BioRuby. BioPHP was developed in December 2005 by Joseba Bikandi at...
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Rostlab TGAC Free and open-source software portal Biology portal BioJava, Biopython, BioRuby, BioPHP, BioPerl, Bioconductor Open Bioinformatics Foundation...
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languages exist as part of the Open Bioinformatics Foundation, including: Biopython BioJava BioRuby BioPHP BioJS Bioconductor Stajich, J. E.; Block, D.; Boulez...
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adopting GMOD components for model organism databases. Bioperl, BioJava, Biopython, BioRuby, etc. Ensembl Gene Ontology DAS Genomics Unified Schema Manatee:...
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