MicX sRNA (formerly known as A10) is a small non-coding RNA found in Vibrio cholerae. It was given the name MicX as it has a similar function to MicA,...
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transcription factors ( σS (RpoS) and σE (RpoE) ) in Enterobacteria. It also regulates sRNA in Vibrio cholerae, a specific example being MicX sRNA. In Salmonella...
9 KB (1,117 words) - 18:16, 5 August 2024
cis and trans with the mRNA species, luxS, ompA and phoP, respectively. This observation describes MicA to be the first known sRNA to carry out antisense...
8 KB (904 words) - 23:57, 2 December 2023
The micF RNA is a non-coding RNA stress response gene found in Escherichia coli and related bacteria that post-transcriptionally controls expression of...
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coli the sRNA MicA depletes OmpA levels, in Vibrio cholerae the sRNA VrrA represses synthesis of OmpA in response to stress. In some bacteria sRNAs regulate...
30 KB (3,499 words) - 11:30, 26 March 2024
sequencing Hfq-binding sRNA found that the Watson strand did indeed encode an sRNA. FnrS has been shown to downregulate 32 different mRNAs in Enterobacteria...
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least nine small RNA families in its genome. The small RNA (sRNA) families were identified through RNomics – the direct analysis of RNA molecules isolated...
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RNA DsrA RNA FnrS RNA GadY RNA GcvB RNA IsrJ RNA MicA RNA / SraD RNA MicC RNA MicF RNA OmrA RNA / OmrB RNA / RygA RNA / RygB RNA / SraE RNA OxyS RNA Qrr...
10 KB (605 words) - 19:21, 29 December 2023
CRISPR (category Non-coding RNA)
PMID 22227115. Hale CR, Zhao P, Olson S, Duff MO, Graveley BR, Wells L, et al. (November 2009). "RNA-guided RNA cleavage by a CRISPR RNA-Cas protein complex". Cell...
128 KB (13,448 words) - 06:38, 14 October 2024
sRNA in S. meliloti and in its closely related strain 2011. Recent deep sequencing-based characterization of the small RNA fraction (50-350 nt) of S....
57 KB (2,278 words) - 18:31, 17 October 2024
envelope stress assays such as this have been used for the study of small RNA (sRNA) responses in Salmonella enterica. Polymyxin SPR741 "Polymyxin B Sulfate...
11 KB (1,015 words) - 07:09, 20 September 2024
applications. Some of the earliest asRNAs were discovered while investigating functional proteins. An example was micF asRNA. While characterizing the outer...
24 KB (2,997 words) - 00:53, 25 July 2024
Escherichia coli sRNA Extracellular RNA List of RNAs Rfam RNA interference Small interfering RNA Small nucleolar RNA-derived microRNA PanDaTox — a database...
7 KB (873 words) - 02:36, 1 December 2023
The sroB RNA (also known as MicM, rybC, or ChiX) is a non-coding RNA gene of 90 nucleotides in length. sroB is found in several Enterobacterial species...
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small RNA AsponA antisense RNA Repression of heat shock gene expression (ROSE) element Pseudomon-1 RNA motif (ErsA sRNA) PrrF RNA Pseudomonas sRNA P16 (RgsA...
92 KB (10,021 words) - 10:24, 7 October 2024
cis-encoded antisense sRNAs. The genomic regions of the trans-encoded αr35 sRNAs exhibit partial conservation mainly limited to the sRNA-coding sequence and...
26 KB (1,756 words) - 12:24, 25 September 2024
sRNA in S. melilloti and in its closely related strain 2011. Recent deep sequencing-based characterization of the small RNA fraction (50-350 nt) of S...
158 KB (2,402 words) - 21:30, 28 March 2024
Post-transcriptional regulation (category RNA)
Post-transcriptional regulation is the control of gene expression at the RNA level. It occurs once the RNA polymerase has been attached to the gene's promoter and is...
27 KB (3,383 words) - 01:17, 8 September 2024
for RNA-guided gene regulation and editing". Nature Methods. 10 (11): 1116–1123. doi:10.1038/nmeth.2681. PMC 3844869. PMID 24076762. Zhang Y, Ge X, Yang...
12 KB (1,421 words) - 00:22, 14 December 2022
sRNA loci, but no known transcription factor binding sites were recognizable in these motifs. All members of the αr45 family are trans-encoded sRNAs transcribed...
70 KB (2,018 words) - 21:31, 28 March 2024
mupirocin-resistant S. aureus were isolated. One strain possessed low-level resistance (MuL: MIC = 8–256 mg/L), and another possessed high-level resistance (MuH: MIC >...
30 KB (2,605 words) - 19:14, 3 October 2024
sRNA in S. melilloti and in its closely related strain 2011. Recent deep sequencing-based characterization of the small RNA fraction (50-350 nt) of S...
54 KB (2,270 words) - 18:29, 17 October 2024
biology, VR-RNA is a small RNA produced by Clostridium perfringens. It functions as a regulator of the two-component VirR/VirS system. VR-RNA regulates...
8 KB (859 words) - 19:01, 29 December 2023
PMID 20979336. S2CID 43670213. Wright, PR (2012). hIntaRNA - Comparative prediction of sRNA targets in prokaryotes (Diploma). Albert-Ludwigs-Universität...
5 KB (571 words) - 11:54, 3 December 2023
Staphylococcus aureus (redirect from Methicillin-sensitive S. aureus)
Zhang X, Sun H, Sun B (February 2014). "ArtR, a novel sRNA of Staphylococcus aureus, regulates α-toxin expression by targeting the 5' UTR of sarT mRNA". Medical...
114 KB (12,721 words) - 16:39, 4 October 2024
third type of sRNA, OxyS, is regulated by OxyR, the primary sensor of oxidative shock. The mechanism by which OxyS interferes with rpoS mRNA translational...
18 KB (2,260 words) - 17:09, 16 September 2024
PhrS is a bacterial small RNA found in Pseudomonas aeruginosa. It was first identified in a RNAomics screen and has since been found to act as a link between...
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PMID 12011463. Bavykin, S. G.; Lysov, Y. P.; Zakhariev, V.; Kelly, J. J.; Jackman, J.; Stahl, D. A.; Cherni, A. (2004). "Use of 16S rRNA, 23S rRNA, and gyrB Gene...
8 KB (905 words) - 23:52, 29 January 2023
231–9. Bibcode:1979ArMic.122..231C. doi:10.1007/bf00411285. PMID 120726. Han C, Gronow S, Teshima H, Lapidus A, Nolan M, Lucas S, et al. (July 2011)....
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Terminator (genetics) (section Non-mRNAs)
signals in the newly synthesized transcript RNA that trigger processes which release the transcript RNA from the transcriptional complex. These processes...
13 KB (1,631 words) - 16:42, 19 September 2024