• WPGMA (Weighted Pair Group Method with Arithmetic Mean) is a simple agglomerative (bottom-up) hierarchical clustering method, generally attributed to...
    11 KB (1,714 words) - 07:17, 9 July 2024
  • (bottom-up) hierarchical clustering method. It also has a weighted variant, WPGMA, and they are generally attributed to Sokal and Michener. Note that the...
    17 KB (2,430 words) - 07:09, 9 July 2024
  • include complete linkage clustering, average linkage clustering (UPGMA and WPGMA), and Ward's method. In the naive algorithm for agglomerative clustering...
    17 KB (2,496 words) - 01:05, 12 November 2024
  • clustering Molecular clock Neighbor-joining Single-linkage clustering UPGMA WPGMA Sorensen T (1948). "A method of establishing groups of equal amplitude in...
    14 KB (2,170 words) - 00:40, 22 June 2024
  • reconstruct the true tree with high probability. Compared with UPGMA and WPGMA, neighbor joining has the advantage that it does not assume all lineages...
    21 KB (2,881 words) - 03:16, 22 June 2024
  • subtrees. The UPGMA (Unweighted Pair Group Method with Arithmetic mean) and WPGMA (Weighted Pair Group Method with Arithmetic mean) methods produce rooted...
    64 KB (8,082 words) - 00:29, 7 November 2024
  • and a distance d are: Some of these can only be recomputed recursively (WPGMA, WPGMC), for many a recursive computation with Lance-Williams-equations...
    26 KB (2,897 words) - 07:23, 11 November 2024
  • lineages. The UPGMA (Unweighted Pair Group Method with Arithmetic mean) and WPGMA (Weighted Pair Group Method with Arithmetic mean) methods produce rooted...
    14 KB (2,016 words) - 20:26, 18 January 2024
  • construction, ultrametric distances are also utilized by the UPGMA and WPGMA methods. These algorithms require a constant-rate assumption and produce...
    11 KB (1,581 words) - 17:22, 22 October 2024
  • Thumbnail for Cluster analysis
    complete linkage clustering (the maximum of object distances), and UPGMA or WPGMA ("Unweighted or Weighted Pair Group Method with Arithmetic Mean", also known...
    69 KB (8,833 words) - 19:53, 19 November 2024
  • Correspondence between HAC linkages and BIRCH distances HAC Linkage BIRCH distance UPGMA D2² WPGMA D0² Ward 2 D4²...
    13 KB (2,276 words) - 16:07, 6 October 2023
  • Vicarious (company) Viterbi algorithm Vowpal Wabbit WACA clustering algorithm WPGMA Ward's method Weasel program Whitening transformation Winnow (algorithm)...
    39 KB (3,386 words) - 20:13, 10 November 2024