マイクロバクテリウム科

マイクロバクテリウム科
分類
ドメイン : 真正細菌 Bacteria
: 放線菌門
Actinobacteria
: 放線菌綱
Actinobacteria
: 放線菌目
Actinomycetales
亜目 : Micrococcineae
: マイクロバクテリウム科
学名
マイクロバクテリウム科
Microbacteriaceae
Park et al. 1995[1]
emend. Zhi et al. 2009[2][3]
タイプ属
マイクロバクテリウム属
Microbacterium
Orla-Jensen 1919[4]
(Approved Lists 1980[5])
属 (2021年8月現在)[26]
  • アグレイア属
    Agreia
    Evtushenko et al. 2001[6][7]
  • アグロコッカス属
    Agrococcus
    Groth et al. 1996[8][9]
  • アグロマイセス属
    Agromyces
    Gledhill and Casida 1969[10]
    (Approved Lists 1980[5])
  • Allohumibacter
    Kim et al. 2016[11][12]
  • Alpinimonas
    Schumann et al. 2012[13][14]
  • Amnibacterium
    Kim and Lee 2011[15][16]
  • Arenivirga
    Hamada et al. 2017[17]
  • Aurantimicrobium
    Nakai et al. 2015[18][19]
  • Canibacter
    Aravena-Román et al. 2014[20]
  • Chryseoglobus
    Baik et al. 2010[21][22]
  • クラビバクター属
    Clavibacter
    Davis et al. 1984[23]
  • Cnuibacter
    Zhou et al. 2016[24][25]
  • Compostimonas
    Kim et al. 2012
  • Conyzicola
    Kim et al. 2014
  • Cryobacterium
    Suzuki et al. 1997
  • Curtobacterium
    Yamada and Komagata 1972 (Approved Lists 1980)
  • Diaminobutyricibacter
    Kim et al. 2014
  • Diaminobutyricimonas
    Jang et al. 2013
  • Frigoribacterium
    Kämpfer et al. 2000
  • Frondihabitans
    Greene et al. 2009
  • Galbitalea
    Kim et al. 2014
  • Glaciibacter
    Katayama et al. 2009
  • Glaciihabitans
    Li et al. 2014
  • Gryllotalpicola
    Kim et al. 2012
  • Gulosibacter
    Manaia et al. 2004
  • Herbiconiux
    Behrendt et al. 2011
  • Homoserinibacter
    Kim et al. 2014
  • Homoserinimonas
    Kim et al. 2012
  • Huakuichenia
    Zhang et al. 2016
  • Humibacter
    Vaz-Moreira et al. 2008
  • Klugiella
    Cook et al. 2008
  • Labedella
    Lee 2007
  • Lacisediminihabitans
    Zhuo et al. 2020
  • Leifsonia
    Evtushenko et al. 2000
  • Leucobacter
    Takeuchi et al. 1996
  • Lysinibacter
    Tuo et al. 2015
  • Lysinimonas
    Jang et al. 2013
  • Marisediminicola
    Li et al. 2010
  • Microbacterium
    Orla-Jensen 1919[4]
    (Approved Lists 1980[5])
  • Microcella
    Tiago et al. 2005
  • Microterricola
    Matsumoto et al. 2008
  • Mycetocola
    Tsukamoto et al. 2001
  • Naasia
    Weon et al. 2013
  • Okibacterium
    Evtushenko et al. 2002
  • Parafrigoribacterium
    Kong et al. 2016
  • Planctomonas
    Liu et al. 2019
  • Plantibacter
    Behrendt et al. 2002
  • Pontimonas
    Jang et al. 2013
  • Protaetiibacter
    Heo et al. 2019
  • Pseudoclavibacter
    Manaia et al. 2004
  • Pseudolysinimonas
    Heo et al. 2019
  • Puzihella
    Sheu et al. 2017
  • Rathayibacter
    Zgurskaya et al. 1993
  • Rhodoglobus
    Sheridan et al. 2003
  • Rhodoluna
    Hahn et al. 2014
  • Rudaibacter
    Kim et al. 2013
  • Salinibacterium
    Han et al. 2003
  • Schumannella
    An et al. 2009
  • Subtercola
    Männistö et al. 2000
  • Yonghaparkia
    Yoon et al. 2006

マイクロバクテリウム科(マイクロバクテリウムか、Microbacteriaceae)とは、真正細菌放線菌目におけるの一つである。グラム陽性土壌微生物である。

分類

[編集]

現在、微生物の分類体系は「原核生物の名前のリストと命名法の提案」(List of Prokaryotic names with Standing in Nomenclature、LPSN)に基づく [26]。一方、米国立生物工学情報センターNational Center for Biotechnology Information、NCBI)[27] は、国際学術団体The All-Species Living Tree Project(LTP)が発行する『16S rRNA-based LTP release 106』に基づく[28]

?'Candidatus Aquiluna rubra' Hahn 2009

?'Candidatus Flaviluna lacus' Hahn 2009

?'Candidatus Limnoluna rubra' Hahn 2009

?'Candidatus Planktoluna difficilis' Hahn 2009

?'Candidatus Rhodoluna' Hahn 2009

?Crocebacterium ilecolaRogers & Peterson 2006

?Cryocola antiquusGavrish et al. 2003

Pseudoclavibacter Manaia et al. 2004 [incl. Gulosibacter molinativorax & Zimmermannella]

Agromyces Gledhill and Casida 1969 emend. Zgurskaya et al. 1992

Humibacter albus Vaz-Moreira et al. 2008

Schumannella luteola An et al. 2009

Curtobacterium Yamada and Komagata 1972

Chryseoglobus frigidaquae Baik et al. 2010

Leifsonia kribbensis Dastager et al. 2009

Agrococcus Groth et al. 1996

Leifsonia Evtushenko et al. 2000 emend. Dastager et al. 2009

Herbiconiux Behrendt et al. 2011

Leifsonia kafniensis Pindi et al. 2009

Phycicola gilvus Lee et al. 2008

Leifsonia pindariensis Reddy et al. 2008

Microterricola viridarii Matsumoto et al. 2008

Leifsonia bigeumensis Dastager et al. 2008

Salinibacterium Han et al. 2003 [incl. Leifsonia rubra & Rhodoglobus]

Leifsonia antarctica Pindi et al. 2009

Glaciibacter superstes Katayama et al. 2009

Agreia Evtushenko et al. 2001

Subtercola Männistö et al. 2000

Leucobacter Takeuchi et al. 1996

Marisediminicola antarctica Li et al. 2010

Frigoribacterium faeni Kämpfer et al. 2000

Frondihabitans Greene et al. 2009 emend. Cardinale et al. 2011

Yonghaparkia alkaliphila Yoon et al. 2006

Microcella Tiago et al. 2005 emend. Tiago et al. 2006

Clavibacter michiganensis (Smith 1910) Davis et al. 1984

Rathayibacter Zgurskaya et al. 1993

Frigoribacterium mesophilum Dastager et al. 2008

Klugiella xanthotipulae Cook et al. 2008

Cryobacterium mesophilum Dastager et al. 2008

Amnibacterium kyonggiense Kim and Lee 2011

Labedella gwakjiensis Lee 2007

Cryobacterium Suzuki et al. 1997 emend. Dastager et al. 2008

Okibacterium fritillariae Evtushenko et al. 2002

Plantibacter Behrendt et al. 2002

Mycetocola Tsukamoto et al. 2001

Microbacterium Orla-Jensen 1919 emend. Takeuchi and Hatano 1998

Notes:

♠: NCBIに発見されているが、LPSNに登録されていない属。

脚注

[編集]
  1. ^ International Journal of Systematic and Evolutionary Microbiology: 418-419. (1995-04-01). doi:10.1099/00207713-45-2-418. 
  2. ^ Xiao-Yang Zhi, Wen-Jun Li, Erko Stackebrandt (2009-03-01). “An update of the structure and 16S rRNA gene sequence-based definition of higher ranks of the class Actinobacteria, with the proposal of two new suborders and four new families and emended descriptions of the existing higher taxa”. International Journal of Systematic and Evolutionary Microbiology: 589-608. doi:10.1099/ijs.0.65780-0. PMID 19244447. 
  3. ^ “Notification that new names and new combinations have appeared in volume 59, part 3, of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology: 1259-1261. (2009-06-01). doi:10.1099/ijs.0.015081-0. 
  4. ^ a b “Orla-Jensen's Classification of Lactic Acid Bacteria”. Journal of Dairy Science. (March 1920). doi:10.3168/jds.S0022-0302(20)94257-1. 
  5. ^ a b c V. B. D. SkermanN, VickiICKI McGowan and P. H. A. SneathATH (1980-01-01). “Approved Lists of Bacterial Names”. International Journal of Systematic and Evolutionary Microbiology: 225-420. doi:10.1099/00207713-30-1-225. 
  6. ^ L I Evtushenko, L V Dorofeeva, T G Dobrovolskaya, G M Streshinskaya, S A Subbotin, J M Tiedje (2001-11-01 pmid=11760949). “Agreia bicolorata gen. nov., sp. nov., to accommodate actinobacteria isolated from narrow reed grass infected by the nematode Heteroanguina graminophila.”. International Journal of Systematic and Evolutionary Microbiology: 2073-2079. doi:10.1099/00207713-51-6-2073. 
  7. ^ J. P. EUZéBY (1997-04-01). “List of Bacterial Names with Standing in Nomenclature: a Folder Available on the Internet”. International Journal of Systematic and Evolutionary Microbiology: 590-2. doi:10.1099/00207713-47-2-590. PMID 9103655. 
  8. ^ INGRID GROTH, P. SCHUMANN, N. WEISS, KARIN MARTIN and F. A. RAINEY (1996-01-01). “Agrococcus jenensis gen. nov., sp. nov., a New Genus of Actinomycetes with Diaminobutyric Acid in the Cell Wall”. International Journal of Systematic and Evolutionary Microbiology: 234-9. doi:10.1099/00207713-46-1-234. PMID 8573501. 
  9. ^ “Notification that New Names and New Combinations Have Appeared in Volume 46, No. 1, of the IJSB”. International Journal of Systematic and Evolutionary Microbiology: 627. (1996-04-01). doi:10.1099/00207713-46-2-627. 
  10. ^ W E Gledhill 1, L E Casida (1969 Sep). “Predominant Catalase-negative Soil Bacteria. III. Agromyces, gen. n., Microorganisms Intermediary to Actinomyces and Nocardia”. Journal of Applied Microbiology 18 (3): 340-9. doi:10.1128/am.18.3.340-349.1969. PMC 377982. PMID 16349860. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC377982/. 
  11. ^ Yu Ri Kim, Tae-Su Kim, Ji-Hye Han, Yochan Joung, Jisun Park, Seung Bum Kim (2016-04-01). “Allohumibacter endophyticus gen. nov., sp. nov., isolated from the root of wild Artemisia princeps (mugwort)”. International Journal of Systematic and Evolutionary Microbiology: 1823-1827. doi:10.1099/ijsem.0.000948. PMID 26842896. 
  12. ^ Aharon Oren, George M. Garrity (2016-07-01). “Notification that new names of prokaryotes, new combinations and new taxonomic opinions have appeared in volume 66, part 4, of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology: 2467-2468. doi:10.1099/ijsem.0.001169. 
  13. ^ Peter Schumann, De-Chao Zhang, Mersiha Redzic, Rosa Margesin (2012-11-01). “Alpinimonas psychrophila gen. nov., sp. nov., an actinobacterium of the family Microbacteriaceae isolated from alpine glacier cryoconite”. International Journal of Systematic and Evolutionary Microbiology: 2724-2730. doi:10.1099/ijs.0.036160-0. PMID 22228665. 
  14. ^ “Notification that new names and new combinations have appeared in volume 62, part 11, of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology: 399-400. (2013-02-01). doi:10.1099/ijs.0.050401-0. 
  15. ^ Sun-Jung Kim, Sang-Seob Lee (2011-01-01). “Amnibacterium kyonggiense gen. nov., sp. nov., a new member of the family Microbacteriaceae”. International Journal of Systematic and Evolutionary Microbiology: 155-159. doi:10.1099/ijs.0.018788-0. PMID 20173001. 
  16. ^ “Notification that new names and new combinations have appeared in volume 61, part 1, of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology: 701-702. (2011-04-01). doi:10.1099/ijs.0.032789-0. 
  17. ^ Moriyuki Hamada, Satomi Saitou, Tomohiko Tamura (2017-09-01). “Arenivirga flava gen. nov., sp. nov., a new member of the family Microbacteriaceae isolated from a mangrove tidal flat”. International Journal of Systematic and Evolutionary Microbiology: 3318-3322. doi:10.1099/ijsem.0.002113. PMID 28857028. 
  18. ^ Ryosuke Nakai, Tomoya Baba, Hironori Niki, Miyuki Nishijima, Takeshi Naganuma (2015-11-01). “Aurantimicrobium minutum gen. nov., sp. nov., a novel ultramicrobacterium of the family Microbacteriaceae, isolated from river water”. International Journal of Systematic and Evolutionary Microbiology: 4072-4079. doi:10.1099/ijsem.0.000541. PMID 26294911. 
  19. ^ Aharon Oren, George M. Garrity. “Notification that new names of prokaryotes, new combinations and new taxonomic opinions have appeared in volume 65, part 11, of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology: 527-529. doi:10.1099/ijsem.0.000847. 
  20. ^ M. Aravena-Román, T. J. J. Inglis, C. Siering, P. Schumann, A. F. Yassin (2014-05-01). “Canibacter oris gen. nov., sp. nov., isolated from an infected human wound”. International Journal of Systematic and Evolutionary Microbiology: 1635-1640. doi:10.1099/ijs.0.058859-0. PMID 24510975. 
  21. ^ Keun Sik Baik, Seong Chan Park, Ho Jun Kim, Kang Hyun Lee, Chi Nam Seong (2010-06-01). “Chryseoglobus frigidaquae gen. nov., sp. nov., a novel member of the family Microbacteriaceae”. International Journal of Systematic and Evolutionary Microbiology: 1311-1316. doi:10.1099/ijs.0.016212-0. PMID 19667371. 
  22. ^ “Notification that new names and new combinations have appeared in volume 60, part 6, of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology: 1987-1988. (2010-09-01). doi:10.1099/ijs.0.027060-0. 
  23. ^ Michael J. Davis, A. Graves Gillaspie Jr., Anne K. Vidaver and Russell W. Harris (1984-04-01). “Clavibacter: a New Genus Containing Some Phytopathogenic Coryneform Bacteria, Including Clavibacter xyli subsp. xyli sp. nov., subsp. nov. and Clavibacter xyli subsp. cynodontis subsp. nov., Pathogens That Cause Ratoon Stunting Disease of Sugarcane and Bermudagrass Stunting Disease”. International Journal of Systematic and Evolutionary Microbiology: 107-117. doi:10.1099/00207713-34-2-107. 
  24. ^ Xun Zhou, Guan Nan Guo, Le Qi Wang, Su Lan Bai, Yan Hong Li (2016-02-01). “Cnuibacter physcomitrellae gen. nov., sp. nov., a novel member of the family Microbacteriaceae isolated from the moss of Physcomitrella patens”. International Journal of Systematic and Evolutionary Microbiology: 680-688. doi:10.1099/ijsem.0.000775. PMID 26582590. 
  25. ^ Aharon Oren, George M. Garrity. “Notification that new names of prokaryotes, new combinations, and new taxonomic opinions have appeared in volume 66, part 2, of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology: 1916-1919. doi:10.1099/ijsem.0.001042. 
  26. ^ a b J.P. Euzéby. “Microbacteriaceae”. List of Prokaryotic names with Standing in Nomenclature (LPSN). 2013年1月27日時点のオリジナルよりアーカイブ。2011年11月17日閲覧。
  27. ^ Sayers. “Microbacteriaceae”. National Center for Biotechnology Information (NCBI) taxonomy database. 2011年6月5日閲覧。
  28. ^ All-Species Living Tree Project.16S rRNA-based LTP release 106 (full tree)”. Silva Comprehensive Ribosomal RNA Database. 2011年11月17日閲覧。